segmentation_RT

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Automatic contouring with the help of deep learning is a nontrivial matter and a research area of its own.

The purpose of segmentation_RT is to provide a quick method to use deep learning for contouring. Three modules are provided to do so:

  • rs2mask: create a deep learning friendly dataset from dicom data.

  • dl: deep learning module for training and testing.

  • mask2rs: create RT Structure Set from a previously generated masks.

This is an early release which only allows the use of CT for the moment. MRI supports will come soon.